../../tmp/servers/virsirnadb/325219043
Result for your query siRNA sequence
RED | =100 % Complementary sequence |
. | =Identical residue |
blue alphabets | =mismatch |
_ | =Gap |
Acc number | Strain name | Start | Alignment | End | % Identity |
Query | virsi1272 | 1 | gactagtagagacaagata | 19 | |
AF177911.1 | Coxsackievirus A16 polyprotein gene, complete cds | 3305 | _.................. | 3322 | 94 |
AY790926.1 | Human coxsackievirus A16 strain shzh00-1, complete genome | 3305 | _.................. | 3322 | 94 |
EU262658.1 | Human coxsackievirus A16 strain shzh05-1, complete genome | 3305 | _.................. | 3322 | 94 |
FJ198212.1 | Human coxsackievirus A16 strain GZ08, complete genome | 3305 | _.................. | 3322 | 94 |
GQ279368.1 | Human coxsackievirus A16 strain SZ/HK08-3, complete genome | 3305 | _.................. | 3322 | 94 |
GQ279371.1 | Human coxsackievirus A16 strain SZ/HK08-7, complete genome | 3305 | _.................. | 3322 | 94 |
HQ269389.1 | Human coxsackievirus A16 isolate XM-CA16-3560, complete genome | 3306 | _.................. | 3323 | 94 |
HQ423141.1 | Human coxsackievirus A16 strain KMM/08, complete genome | 3305 | _.................. | 3322 | 94 |
AY302552.1 | Human echovirus 29 strain JV-10 complete genome | 3263 | _..a.c............. | 3280 | 84 |
EF667344.1 | Human enterovirus 92 strain RJG7, complete genome | 4126 | ____.t............_ | 4139 | 68 |
EF667344.1 | Human enterovirus 92 strain RJG7, complete genome | 2588 | ______............_ | 2599 | 63 |
AY302557.1 | Human echovirus 4 strain Pesacek complete genome | 644 | ...........ct.tt... | 662 | 78 |
AJ293918.1 | Human poliovirus type 3 complete genome, live-attenuated strain USOL- | 3889 | ____.t.g........... | 3903 | 68 |
AY421769.1 | Human coxsackievirus A14 strain G-14, complete genome | 1864 | .c.a...........____ | 1878 | 68 |
D00625.1 | POL2CG1 Human poliovirus 2 genomic RNA, complete genome | 4242 | ______..........c.. | 4254 | 63 |
M12197.1 | POL2LAN Poliovirus type 2 (Lansing strain), complete genome | 4242 | ______..........c.. | 4254 | 63 |
AY238473.1 | Human poliovirus 2 strain MEF-1 polyprotein gene, complete cds | 4242 | ______..........c.. | 4254 | 63 |
DQ358078.1 | Human coxsackievirus A20 serotype CAV20a, complete genome | 4247 | ______..........c.. | 4259 | 63 |
EF456706.1 | Human poliovirus 1 isolate 7/b/97 nonfunctional polyprotein gene, com | 4196 | ______..........t.. | 4208 | 63 |
X84981.1 | Echovirus 9 (strain Hill), complete genome | 7322 | ____...........____ | 7332 | 57 |
X92886.1 | Echovirus 9 (strain Barty), complete genome | 3586 | ...........________ | 3596 | 57 |
AF317694.1 | Human echovirus 18 strain Metcalf polyprotein gene, complete cds | 7311 | ____...........____ | 7321 | 57 |
AF524866.1 | Human echovirus 9 strain Barty, complete genome | 3588 | ...........________ | 3598 | 57 |
HM777023.1 | Human echovirus 18 isolate Kor05-ECV18-054cn, complete genome | 7314 | ____...........____ | 7324 | 57 |
AB575911.1 | Human enterovirus 71 gene for polyprotein, complete cds, isolate: 100 | 6004 | _..........._______ | 6014 | 57 |
AB575912.1 | Human enterovirus 71 gene for polyprotein, complete cds, isolate: 108 | 6018 | _..........._______ | 6028 | 57 |